<?xml version="1.0" encoding="ascii"?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
          "DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
<head>
  <title>Identifier Index</title>
  <link rel="stylesheet" href="epydoc.css" type="text/css" />
  <script type="text/javascript" src="epydoc.js"></script>
</head>

<body bgcolor="white" text="black" link="blue" vlink="#204080"
      alink="#204080">
<!-- ==================== NAVIGATION BAR ==================== -->
<table class="navbar" border="0" width="100%" cellpadding="0"
       bgcolor="#a0c0ff" cellspacing="0">
  <tr valign="middle">

  <!-- Tree link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="module-tree.html">Trees</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Index link -->
      <th bgcolor="#70b0f0" class="navbar-select"
          >&nbsp;&nbsp;&nbsp;Indices&nbsp;&nbsp;&nbsp;</th>

  <!-- Help link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="help.html">Help</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Project homepage -->
      <th class="navbar" align="right" width="100%">
        <table border="0" cellpadding="0" cellspacing="0">
          <tr><th class="navbar" align="center"
            ><a class="navbar" target="_top" href="http://dadi.googlecode.com">dadi</a></th>
          </tr></table></th>
  </tr>
</table>
<table width="100%" cellpadding="0" cellspacing="0">
  <tr valign="top">
    <td width="100%">&nbsp;</td>
    <td>
      <table cellpadding="0" cellspacing="0">
        <!-- hide/show private -->
        <tr><td align="right"><span class="options">[<a href="javascript:void(0);" class="privatelink"
    onclick="toggle_private();">hide&nbsp;private</a>]</span></td></tr>
        <tr><td align="right"><span class="options"
            >[<a href="frames.html" target="_top">frames</a
            >]&nbsp;|&nbsp;<a href="identifier-index.html"
            target="_top">no&nbsp;frames</a>]</span></td></tr>
      </table>
    </td>
  </tr>
</table>
<table border="0" width="100%">
<tr valign="bottom"><td>
<h1 class="epydoc">Identifier Index</h1>
</td><td>
[
 <a href="#A">A</a>
 <a href="#B">B</a>
 <a href="#C">C</a>
 <a href="#D">D</a>
 <a href="#E">E</a>
 <a href="#F">F</a>
 <a href="#G">G</a>
 <a href="#H">H</a>
 <a href="#I">I</a>
  J
  K
 <a href="#L">L</a>
 <a href="#M">M</a>
 <a href="#N">N</a>
 <a href="#O">O</a>
 <a href="#P">P</a>
 <a href="#Q">Q</a>
 <a href="#R">R</a>
 <a href="#S">S</a>
 <a href="#T">T</a>
 <a href="#U">U</a>
  V
 <a href="#W">W</a>
  X
  Y
 <a href="#Z">Z</a>
 <a href="#_">_</a>
]
</td></table>
<table border="0" width="100%">
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="A">A</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#Anscombe_Poisson_residual">Anscombe_Poisson_residual()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#array_from_file">array_from_file()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#array_to_file">array_to_file()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
</tr>
<tr><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td></tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="B">B</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Demographics1D-module.html#bottlegrowth">bottlegrowth()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics1D-module.html">dadi.Demographics1D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#bottlegrowth_split">bottlegrowth_split()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#bottlegrowth">bottlegrowth()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#bottlegrowth_split_mig">bottlegrowth_split_mig()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="C">C</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#code">code</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#cubic_extrap">cubic_extrap()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#currdir">currdir</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
</tr>
<tr><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td></tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="D">D</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi-module.html">dadi</a></td>
<td width="33%" class="link-index"><a href="dadi.Demographics1D-module.html">Demographics1D</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
<td width="33%" class="link-index"><a href="matplotlib.ticker.TickHelper.DummyAxis-class.html">DummyAxis</a></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#delayed_flush">delayed_flush()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html">Demographics2D</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="E">E</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#end_point_first_derivs">end_point_first_derivs()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#estimate_best_exp_grid_crwd">estimate_best_exp_grid_crwd()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#exponential_grid">exponential_grid()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#ensure_1arg_func">ensure_1arg_func()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#eval_func_over_list">eval_func_over_list()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="F">F</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#fixed_size_sample">fixed_size_sample()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#from_data_dict_corrected">from_data_dict_corrected()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#from_phi">from_phi()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#fold">fold()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#from_file">from_file()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#from_sfscode_file">from_sfscode_file()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#from_data_dict">from_data_dict()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#from_ms_file">from_ms_file()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#Fst">Fst()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="G">G</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Demographics1D-module.html#growth">growth()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics1D-module.html">dadi.Demographics1D</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
<tr><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td></tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="H">H</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#HAVE_PYPAR">HAVE_PYPAR</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Hessian-module.html#hessian">hessian()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Hessian-module.html">dadi.Hessian</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Hessian-module.html">Hessian</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Hessian-module.html#hessian_elem">hessian_elem()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Hessian-module.html">dadi.Hessian</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="I">I</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#IM">IM()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_3Dx">implicit_3Dx</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_precalc_3Dz">implicit_precalc_3Dz</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#IM_mscore">IM_mscore()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_3Dy">implicit_3Dy</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#index_exp">index_exp</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#IM_pre">IM_pre()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_3Dz">implicit_3Dz</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html">Inference</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#IM_pre_mscore">IM_pre_mscore()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_precalc_2Dx">implicit_precalc_2Dx</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html">Integration</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_1Dx">implicit_1Dx</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_precalc_2Dy">implicit_precalc_2Dy</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html">integration_c</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_2Dx">implicit_2Dx</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_precalc_3Dx">implicit_precalc_3Dx</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#intersect_masks">intersect_masks()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_2Dy">implicit_2Dy</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#implicit_precalc_3Dy">implicit_precalc_3Dy</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="L">L</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#linear_extrap">linear_extrap()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#ll_multinom_per_bin">ll_multinom_per_bin()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#logger">logger</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#linear_Poisson_residual">linear_Poisson_residual()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#ll_per_bin">ll_per_bin()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#logger">logger</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#ll">ll()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Hessian-module.html#logger">logger</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Hessian-module.html">dadi.Hessian</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#logger">logger</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#ll_multinom">ll_multinom()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#logger">logger</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod-module.html#logger">logger</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod-module.html">dadi.Spectrum_mod</a>)</span></td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="M">M</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#make_data_dict">make_data_dict()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#marginalize">marginalize()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#ms_command">ms_command()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#make_extrap_func">make_extrap_func()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#mask_corners">mask_corners()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="scripts.ms_jsfs-module.html">ms_jsfs</a><br />
<span class="index-where">(in&nbsp;<a href="scripts-module.html">scripts</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#make_extrap_log_func">make_extrap_log_func()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#minus_ll">minus_ll()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#my_host">my_host</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#make_fux_table">make_fux_table()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#minus_ll_multinom">minus_ll_multinom()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#my_rank">my_rank</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#make_parallel_gradient_func">make_parallel_gradient_func()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html">Misc</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="N">N</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#Npop">Npop()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#num_procs">num_procs</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html">Numerics</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
</tr>
<tr><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td></tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="O">O</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#old_timescale_factor">old_timescale_factor</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#optimally_scaled_sfs">optimally_scaled_sfs()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#optimize_log">optimize_log()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#one_pop">one_pop()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#optimize">optimize()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#optimize_log_fmin">optimize_log_fmin()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#one_pop_X">one_pop_X()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#optimize_grid">optimize_grid()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#optimize_log_lbfgsb">optimize_log_lbfgsb()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#optimal_sfs_scaling">optimal_sfs_scaling()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#optimize_lbfgsb">optimize_lbfgsb()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="P">P</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#perturb_params">perturb_params()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_2D_to_3D_split_2">phi_2D_to_3D_split_2()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_2d_comp_Poisson">plot_2d_comp_Poisson()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_1D">phi_1D()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_3D_admix_1_and_2_into_3">phi_3D_admix_1_and_2_into_3()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_2d_resid">plot_2d_resid()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_1D_genic">phi_1D_genic()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_3D_admix_1_and_3_into_2">phi_3D_admix_1_and_3_into_2()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_3d_comp_multinom">plot_3d_comp_multinom()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_1D_snm">phi_1D_snm()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_3D_admix_2_and_3_into_1">phi_3D_admix_2_and_3_into_1()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_3d_comp_Poisson">plot_3d_comp_Poisson()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_1D_to_2D">phi_1D_to_2D()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html">PhiManip</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_3d_spectrum">plot_3d_spectrum()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_1D_X">phi_1D_X()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#pi">pi()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_3d_spectrum_mayavi">plot_3d_spectrum_mayavi()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_2D_admix_1_into_2">phi_2D_admix_1_into_2()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_1d_comp_multinom">plot_1d_comp_multinom()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_single_2d_sfs">plot_single_2d_sfs()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_2D_admix_2_into_1">phi_2D_admix_2_into_1()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_1d_comp_Poisson">plot_1d_comp_Poisson()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html">Plotting</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_2D_to_3D_admix">phi_2D_to_3D_admix()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_1d_fs">plot_1d_fs()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#project">project()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#phi_2D_to_3D_split_1">phi_2D_to_3D_split_1()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#plot_2d_comp_multinom">plot_2d_comp_multinom()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="Q">Q</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#quadratic_extrap">quadratic_extrap()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#quartic_extrap">quartic_extrap()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#quadratic_grid">quadratic_grid()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#quintic_extrap">quintic_extrap()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="R">R</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#remove_pop">remove_pop()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#reverse_array">reverse_array()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html">RunInParallel</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
</tr>
<tr><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td></tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="S">S</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#S">S()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Demographics1D-module.html#snm">snm()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics1D-module.html">dadi.Demographics1D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#split_mig">split_mig()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#sample">sample()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#snm">snm()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#split_mig_mscore">split_mig_mscore()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#sample_sizes">sample_sizes()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics1D-module.html">dadi.Demographics1D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.RunInParallel.Statement-class.html">Statement</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#scramble_pop_ids">scramble_pop_ids()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#statement_to_all_workers">statement_to_all_workers()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="scripts-module.html">scripts</a></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a><br />
<span class="index-where">(in&nbsp;dadi.Spectrum_mod)</span></td>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#stop_workers">stop_workers()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#set_timescale_factor">set_timescale_factor()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod-module.html">Spectrum_mod</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="T">T</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#Tajima_D">Tajima_D()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#total_instantaneous_rate">total_instantaneous_rate()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.tridiag-module.html#tridiag_fl">tridiag_fl</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.tridiag-module.html">dadi.tridiag</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Demographics1D-module.html#three_epoch">three_epoch()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics1D-module.html">dadi.Demographics1D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#trapz">trapz()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Demographics1D-module.html#two_epoch">two_epoch()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics1D-module.html">dadi.Demographics1D</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#three_pops">three_pops()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#tri_freq_dict_to_array">tri_freq_dict_to_array()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#two_pops">two_pops()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#timescale_factor">timescale_factor</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.tridiag-module.html">tridiag</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#to_file">to_file()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.tridiag-module.html#tridiag">tridiag</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.tridiag-module.html">dadi.tridiag</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="U">U</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#unfold">unfold()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#use_delj_trick">use_delj_trick</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#unmask_all">unmask_all()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#use_old_timestep">use_old_timestep</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="W">W</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#Watterson_theta">Watterson_theta()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
<tr><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td></tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="Z">Z</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#zero_diag">zero_diag()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
<tr><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td><td class="link-index">&nbsp;</td></tr>
</table>
</td></tr>
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="_">_</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#__array_finalize__">__array_finalize__()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_check_other_folding">_check_other_folding()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_Mfunc1D">_Mfunc1D()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#__array_priority__">__array_priority__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_compute_delj">_compute_delj()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_Mfunc1D_X">_Mfunc1D_X()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#__array_wrap__">__array_wrap__()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_compute_dfactor">_compute_dfactor()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_Mfunc2D">_Mfunc2D()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Plotting._sfsTickLocator-class.html#__call__">__call__()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting._sfsTickLocator-class.html" onclick="show_private();">_sfsTickLocator</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_compute_dt">_compute_dt()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_Mfunc3D">_Mfunc3D()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.RunInParallel.Statement-class.html#__init__">__init__()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel.Statement-class.html">Statement</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#_counter">_counter</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#_object_func">_object_func()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#__new__">__new__()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_counts_per_entry">_counts_per_entry()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#_object_func_log">_object_func_log()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Demographics1D-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics1D-module.html">dadi.Demographics1D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#_ctf">_ctf</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_one_pop_const_params">_one_pop_const_params()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Demographics2D-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Demographics2D-module.html">dadi.Demographics2D</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_data_by_tri">_data_by_tri()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_one_pop_const_params_X">_one_pop_const_params_X()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Hessian-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Hessian-module.html">dadi.Hessian</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi-module.html#_directory">_directory</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#_out_of_bounds_val">_out_of_bounds_val</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_ensure_dimension">_ensure_dimension()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_project_one_axis">_project_one_axis()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#_extend_mapping">_extend_mapping</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#_project_params_down">_project_params_down()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_from_phi_1D_analytic">_from_phi_1D_analytic()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#_project_params_up">_project_params_up()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_from_phi_1D_direct">_from_phi_1D_direct()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#_projection_cache">_projection_cache</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_from_phi_2D_admix_props">_from_phi_2D_admix_props()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Plotting._sfsTickLocator-class.html">_sfsTickLocator</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Plotting-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Plotting-module.html">dadi.Plotting</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_from_phi_2D_analytic">_from_phi_2D_analytic()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi-module.html#_svn_file">_svn_file</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.RunInParallel-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.RunInParallel-module.html">dadi.RunInParallel</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_from_phi_2D_direct">_from_phi_2D_direct()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Inference-module.html#_theta_store">_theta_store</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Inference-module.html">dadi.Inference</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_from_phi_3D_admix_props">_from_phi_3D_admix_props()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#_three_pop_admixture_intermediates">_three_pop_admixture_intermediates()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.integration_c-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.integration_c-module.html">dadi.integration_c</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_from_phi_3D_analytic">_from_phi_3D_analytic()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_three_pops_const_params">_three_pops_const_params()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.tridiag-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.tridiag-module.html">dadi.tridiag</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_from_phi_3D_direct">_from_phi_3D_direct()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_total_per_entry">_total_per_entry()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="scripts-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="scripts-module.html">scripts</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_get_Npop">_get_Npop()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#_two_pop_admixture_intermediates">_two_pop_admixture_intermediates()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="scripts.ms_jsfs-module.html#__package__">__package__</a><br />
<span class="index-where">(in&nbsp;<a href="scripts.ms_jsfs-module.html">scripts.ms_jsfs</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_get_sample_sizes">_get_sample_sizes()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_two_pops_const_params">_two_pops_const_params()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#__repr__">__repr__()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_inject_mutations_1D">_inject_mutations_1D()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Spectrum_mod.Spectrum-class.html#_update_from">_update_from()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Spectrum_mod.Spectrum-class.html">Spectrum</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi-module.html#__SVNVERSION__">__SVNVERSION__</a><br />
<span class="index-where">(in&nbsp;<a href="dadi-module.html">dadi</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_inject_mutations_1D_X">_inject_mutations_1D_X()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_Vfunc">_Vfunc()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Misc-module.html#__times_last_flushed">__times_last_flushed</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Misc-module.html">dadi.Misc</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_inject_mutations_2D">_inject_mutations_2D()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_Vfunc_X">_Vfunc_X()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.PhiManip-module.html#_admixture_intermediates">_admixture_intermediates()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.PhiManip-module.html">dadi.PhiManip</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Integration-module.html#_inject_mutations_3D">_inject_mutations_3D()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Integration-module.html">dadi.Integration</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#_cached_projection">_cached_projection()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index"><a href="dadi.Numerics-module.html#_lncomb">_lncomb()</a><br />
<span class="index-where">(in&nbsp;<a href="dadi.Numerics-module.html">dadi.Numerics</a>)</span></td>
<td width="33%" class="link-index">&nbsp;</td>
</tr>
</table>
</td></tr>
</table>
<br /><br /><!-- ==================== NAVIGATION BAR ==================== -->
<table class="navbar" border="0" width="100%" cellpadding="0"
       bgcolor="#a0c0ff" cellspacing="0">
  <tr valign="middle">

  <!-- Tree link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="module-tree.html">Trees</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Index link -->
      <th bgcolor="#70b0f0" class="navbar-select"
          >&nbsp;&nbsp;&nbsp;Indices&nbsp;&nbsp;&nbsp;</th>

  <!-- Help link -->
      <th>&nbsp;&nbsp;&nbsp;<a
        href="help.html">Help</a>&nbsp;&nbsp;&nbsp;</th>

  <!-- Project homepage -->
      <th class="navbar" align="right" width="100%">
        <table border="0" cellpadding="0" cellspacing="0">
          <tr><th class="navbar" align="center"
            ><a class="navbar" target="_top" href="http://dadi.googlecode.com">dadi</a></th>
          </tr></table></th>
  </tr>
</table>
<table border="0" cellpadding="0" cellspacing="0" width="100%%">
  <tr>
    <td align="left" class="footer">
    <a href="epydoc-log.html">Generated by Epydoc
    3.0.1 on Fri Dec 14 15:16:34 2012</a>
    </td>
    <td align="right" class="footer">
      <a target="mainFrame" href="http://epydoc.sourceforge.net"
        >http://epydoc.sourceforge.net</a>
    </td>
  </tr>
</table>

<script type="text/javascript">
  <!--
  // Private objects are initially displayed (because if
  // javascript is turned off then we want them to be
  // visible); but by default, we want to hide them.  So hide
  // them unless we have a cookie that says to show them.
  checkCookie();
  // -->
</script>
</body>
</html>
